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21. Personalized RNA neoantigen vaccines stimulate T cells in pancreatic cancer.

作者: Luis A Rojas.;Zachary Sethna.;Kevin C Soares.;Cristina Olcese.;Nan Pang.;Erin Patterson.;Jayon Lihm.;Nicholas Ceglia.;Pablo Guasp.;Alexander Chu.;Rebecca Yu.;Adrienne Kaya Chandra.;Theresa Waters.;Jennifer Ruan.;Masataka Amisaki.;Abderezak Zebboudj.;Zagaa Odgerel.;George Payne.;Evelyna Derhovanessian.;Felicitas Müller.;Ina Rhee.;Mahesh Yadav.;Anton Dobrin.;Michel Sadelain.;Marta Łuksza.;Noah Cohen.;Laura Tang.;Olca Basturk.;Mithat Gönen.;Seth Katz.;Richard Kinh Do.;Andrew S Epstein.;Parisa Momtaz.;Wungki Park.;Ryan Sugarman.;Anna M Varghese.;Elizabeth Won.;Avni Desai.;Alice C Wei.;Michael I D'Angelica.;T Peter Kingham.;Ira Mellman.;Taha Merghoub.;Jedd D Wolchok.;Ugur Sahin.;Özlem Türeci.;Benjamin D Greenbaum.;William R Jarnagin.;Jeffrey Drebin.;Eileen M O'Reilly.;Vinod P Balachandran.
来源: Nature. 2023年618卷7963期144-150页
Pancreatic ductal adenocarcinoma (PDAC) is lethal in 88% of patients1, yet harbours mutation-derived T cell neoantigens that are suitable for vaccines 2,3. Here in a phase I trial of adjuvant autogene cevumeran, an individualized neoantigen vaccine based on uridine mRNA-lipoplex nanoparticles, we synthesized mRNA neoantigen vaccines in real time from surgically resected PDAC tumours. After surgery, we sequentially administered atezolizumab (an anti-PD-L1 immunotherapy), autogene cevumeran (a maximum of 20 neoantigens per patient) and a modified version of a four-drug chemotherapy regimen (mFOLFIRINOX, comprising folinic acid, fluorouracil, irinotecan and oxaliplatin). The end points included vaccine-induced neoantigen-specific T cells by high-threshold assays, 18-month recurrence-free survival and oncologic feasibility. We treated 16 patients with atezolizumab and autogene cevumeran, then 15 patients with mFOLFIRINOX. Autogene cevumeran was administered within 3 days of benchmarked times, was tolerable and induced de novo high-magnitude neoantigen-specific T cells in 8 out of 16 patients, with half targeting more than one vaccine neoantigen. Using a new mathematical strategy to track T cell clones (CloneTrack) and functional assays, we found that vaccine-expanded T cells comprised up to 10% of all blood T cells, re-expanded with a vaccine booster and included long-lived polyfunctional neoantigen-specific effector CD8+ T cells. At 18-month median follow-up, patients with vaccine-expanded T cells (responders) had a longer median recurrence-free survival (not reached) compared with patients without vaccine-expanded T cells (non-responders; 13.4 months, P = 0.003). Differences in the immune fitness of the patients did not confound this correlation, as responders and non-responders mounted equivalent immunity to a concurrent unrelated mRNA vaccine against SARS-CoV-2. Thus, adjuvant atezolizumab, autogene cevumeran and mFOLFIRINOX induces substantial T cell activity that may correlate with delayed PDAC recurrence.

22. Blinded, randomized trial of sonographer versus AI cardiac function assessment.

作者: Bryan He.;Alan C Kwan.;Jae Hyung Cho.;Neal Yuan.;Charles Pollick.;Takahiro Shiota.;Joseph Ebinger.;Natalie A Bello.;Janet Wei.;Kiranbir Josan.;Grant Duffy.;Melvin Jujjavarapu.;Robert Siegel.;Susan Cheng.;James Y Zou.;David Ouyang.
来源: Nature. 2023年616卷7957期520-524页
Artificial intelligence (AI) has been developed for echocardiography1-3, although it has not yet been tested with blinding and randomization. Here we designed a blinded, randomized non-inferiority clinical trial (ClinicalTrials.gov ID: NCT05140642; no outside funding) of AI versus sonographer initial assessment of left ventricular ejection fraction (LVEF) to evaluate the impact of AI in the interpretation workflow. The primary end point was the change in the LVEF between initial AI or sonographer assessment and final cardiologist assessment, evaluated by the proportion of studies with substantial change (more than 5% change). From 3,769 echocardiographic studies screened, 274 studies were excluded owing to poor image quality. The proportion of studies substantially changed was 16.8% in the AI group and 27.2% in the sonographer group (difference of -10.4%, 95% confidence interval: -13.2% to -7.7%, P < 0.001 for non-inferiority, P < 0.001 for superiority). The mean absolute difference between final cardiologist assessment and independent previous cardiologist assessment was 6.29% in the AI group and 7.23% in the sonographer group (difference of -0.96%, 95% confidence interval: -1.34% to -0.54%, P < 0.001 for superiority). The AI-guided workflow saved time for both sonographers and cardiologists, and cardiologists were not able to distinguish between the initial assessments by AI versus the sonographer (blinding index of 0.088). For patients undergoing echocardiographic quantification of cardiac function, initial assessment of LVEF by AI was non-inferior to assessment by sonographers.

23. The menin inhibitor revumenib in KMT2A-rearranged or NPM1-mutant leukaemia.

作者: Ghayas C Issa.;Ibrahim Aldoss.;John DiPersio.;Branko Cuglievan.;Richard Stone.;Martha Arellano.;Michael J Thirman.;Manish R Patel.;David S Dickens.;Shalini Shenoy.;Neerav Shukla.;Hagop Kantarjian.;Scott A Armstrong.;Florian Perner.;Jennifer A Perry.;Galit Rosen.;Rebecca G Bagley.;Michael L Meyers.;Peter Ordentlich.;Yu Gu.;Vinit Kumar.;Steven Smith.;Gerard M McGeehan.;Eytan M Stein.
来源: Nature. 2023年615卷7954期920-924页
Targeting critical epigenetic regulators reverses aberrant transcription in cancer, thereby restoring normal tissue function1-3. The interaction of menin with lysine methyltransferase 2A (KMT2A), an epigenetic regulator, is a dependence in acute leukaemia caused by either rearrangement of KMT2A or mutation of the nucleophosmin 1 gene (NPM1)4-6. KMT2A rearrangements occur in up to 10% of acute leukaemias and have an adverse prognosis, whereas NPM1 mutations occur in up to 30%, forming the most common genetic alteration in acute myeloid leukaemia7,8. Here, we describe the results of the first-in-human phase 1 clinical trial investigating revumenib (SNDX-5613), a potent and selective oral inhibitor of the menin-KMT2A interaction, in patients with relapsed or refractory acute leukaemia (ClinicalTrials.gov, NCT04065399). We show that therapy with revumenib was associated with a low frequency of grade 3 or higher treatment-related adverse events and a 30% rate of complete remission or complete remission with partial haematologic recovery (CR/CRh) in the efficacy analysis population. Asymptomatic prolongation of the QT interval on electrocardiography was identified as the only dose-limiting toxicity. Remissions occurred in leukaemias refractory to multiple previous lines of therapy. We demonstrate clearance of residual disease using sensitive clinical assays and identify hallmarks of differentiation into normal haematopoietic cells, including differentiation syndrome. These data establish menin inhibition as a therapeutic strategy for susceptible acute leukaemia subtypes.

24. MEN1 mutations mediate clinical resistance to menin inhibition.

作者: Florian Perner.;Eytan M Stein.;Daniela V Wenge.;Sukrit Singh.;Jeonghyeon Kim.;Athina Apazidis.;Homa Rahnamoun.;Disha Anand.;Christian Marinaccio.;Charlie Hatton.;Yanhe Wen.;Richard M Stone.;David Schaller.;Shoron Mowla.;Wenbin Xiao.;Holly A Gamlen.;Aaron J Stonestrom.;Sonali Persaud.;Elizabeth Ener.;Jevon A Cutler.;John G Doench.;Gerard M McGeehan.;Andrea Volkamer.;John D Chodera.;Radosław P Nowak.;Eric S Fischer.;Ross L Levine.;Scott A Armstrong.;Sheng F Cai.
来源: Nature. 2023年615卷7954期913-919页
Chromatin-binding proteins are critical regulators of cell state in haematopoiesis1,2. Acute leukaemias driven by rearrangement of the mixed lineage leukaemia 1 gene (KMT2Ar) or mutation of the nucleophosmin gene (NPM1) require the chromatin adapter protein menin, encoded by the MEN1 gene, to sustain aberrant leukaemogenic gene expression programs3-5. In a phase 1 first-in-human clinical trial, the menin inhibitor revumenib, which is designed to disrupt the menin-MLL1 interaction, induced clinical responses in patients with leukaemia with KMT2Ar or mutated NPM1 (ref. 6). Here we identified somatic mutations in MEN1 at the revumenib-menin interface in patients with acquired resistance to menin inhibition. Consistent with the genetic data in patients, inhibitor-menin interface mutations represent a conserved mechanism of therapeutic resistance in xenograft models and in an unbiased base-editor screen. These mutants attenuate drug-target binding by generating structural perturbations that impact small-molecule binding but not the interaction with the natural ligand MLL1, and prevent inhibitor-induced eviction of menin and MLL1 from chromatin. To our knowledge, this study is the first to demonstrate that a chromatin-targeting therapeutic drug exerts sufficient selection pressure in patients to drive the evolution of escape mutants that lead to sustained chromatin occupancy, suggesting a common mechanism of therapeutic resistance.

25. Non-viral precision T cell receptor replacement for personalized cell therapy.

作者: Susan P Foy.;Kyle Jacoby.;Daniela A Bota.;Theresa Hunter.;Zheng Pan.;Eric Stawiski.;Yan Ma.;William Lu.;Songming Peng.;Clifford L Wang.;Benjamin Yuen.;Olivier Dalmas.;Katharine Heeringa.;Barbara Sennino.;Andy Conroy.;Michael T Bethune.;Ines Mende.;William White.;Monica Kukreja.;Swetha Gunturu.;Emily Humphrey.;Adeel Hussaini.;Duo An.;Adam J Litterman.;Boi Bryant Quach.;Alphonsus H C Ng.;Yue Lu.;Chad Smith.;Katie M Campbell.;Daniel Anaya.;Lindsey Skrdlant.;Eva Yi-Hsuan Huang.;Ventura Mendoza.;Jyoti Mathur.;Luke Dengler.;Bhamini Purandare.;Robert Moot.;Michael C Yi.;Roel Funke.;Alison Sibley.;Todd Stallings-Schmitt.;David Y Oh.;Bartosz Chmielowski.;Mehrdad Abedi.;Yuan Yuan.;Jeffrey A Sosman.;Sylvia M Lee.;Adam J Schoenfeld.;David Baltimore.;James R Heath.;Alex Franzusoff.;Antoni Ribas.;Arati V Rao.;Stefanie J Mandl.
来源: Nature. 2023年615卷7953期687-696页
T cell receptors (TCRs) enable T cells to specifically recognize mutations in cancer cells1-3. Here we developed a clinical-grade approach based on CRISPR-Cas9 non-viral precision genome-editing to simultaneously knockout the two endogenous TCR genes TRAC (which encodes TCRα) and TRBC (which encodes TCRβ). We also inserted into the TRAC locus two chains of a neoantigen-specific TCR (neoTCR) isolated from circulating T cells of patients. The neoTCRs were isolated using a personalized library of soluble predicted neoantigen-HLA capture reagents. Sixteen patients with different refractory solid cancers received up to three distinct neoTCR transgenic cell products. Each product expressed a patient-specific neoTCR and was administered in a cell-dose-escalation, first-in-human phase I clinical trial ( NCT03970382 ). One patient had grade 1 cytokine release syndrome and one patient had grade 3 encephalitis. All participants had the expected side effects from the lymphodepleting chemotherapy. Five patients had stable disease and the other eleven had disease progression as the best response on the therapy. neoTCR transgenic T cells were detected in tumour biopsy samples after infusion at frequencies higher than the native TCRs before infusion. This study demonstrates the feasibility of isolating and cloning multiple TCRs that recognize mutational neoantigens. Moreover, simultaneous knockout of the endogenous TCR and knock-in of neoTCRs using single-step, non-viral precision genome-editing are achieved. The manufacture of neoTCR engineered T cells at clinical grade, the safety of infusing up to three gene-edited neoTCR T cell products and the ability of the transgenic T cells to traffic to the tumours of patients are also demonstrated.

26. Neoadjuvant relatlimab and nivolumab in resectable melanoma.

作者: Rodabe N Amaria.;Michael Postow.;Elizabeth M Burton.;Michael T Tetzlaff.;Merrick I Ross.;Carlos Torres-Cabala.;Isabella C Glitza.;Fei Duan.;Denái R Milton.;Klaus Busam.;Lauren Simpson.;Jennifer L McQuade.;Michael K Wong.;Jeffrey E Gershenwald.;Jeffrey E Lee.;Ryan P Goepfert.;Emily Z Keung.;Sarah B Fisher.;Allison Betof-Warner.;Alexander N Shoushtari.;Margaret Callahan.;Daniel Coit.;Edmund K Bartlett.;Danielle Bello.;Parisa Momtaz.;Courtney Nicholas.;Aidi Gu.;Xuejun Zhang.;Brinda Rao Korivi.;Madhavi Patnana.;Sapna P Patel.;Adi Diab.;Anthony Lucci.;Victor G Prieto.;Michael A Davies.;James P Allison.;Padmanee Sharma.;Jennifer A Wargo.;Charlotte Ariyan.;Hussein A Tawbi.
来源: Nature. 2022年611卷7934期155-160页
Relatlimab and nivolumab combination immunotherapy improves progression-free survival over nivolumab monotherapy in patients with unresectable advanced melanoma1. We investigated this regimen in patients with resectable clinical stage III or oligometastatic stage IV melanoma (NCT02519322). Patients received two neoadjuvant doses (nivolumab 480 mg and relatlimab 160 mg intravenously every 4 weeks) followed by surgery, and then ten doses of adjuvant combination therapy. The primary end point was pathologic complete response (pCR) rate2. The combination resulted in 57% pCR rate and 70% overall pathologic response rate among 30 patients treated. The radiographic response rate using Response Evaluation Criteria in Solid Tumors 1.1 was 57%. No grade 3-4 immune-related adverse events were observed in the neoadjuvant setting. The 1- and 2-year recurrence-free survival rate was 100% and 92% for patients with any pathologic response, compared to 88% and 55% for patients who did not have a pathologic response (P = 0.005). Increased immune cell infiltration at baseline, and decrease in M2 macrophages during treatment, were associated with pathologic response. Our results indicate that neoadjuvant relatlimab and nivolumab induces a high pCR rate. Safety during neoadjuvant therapy is favourable compared to other combination immunotherapy regimens. These data, in combination with the results of the RELATIVITY-047 trial1, provide further confirmation of the efficacy and safety of this new immunotherapy regimen.

27. Genomics to select treatment for patients with metastatic breast cancer.

作者: Fabrice Andre.;Thomas Filleron.;Maud Kamal.;Fernanda Mosele.;Monica Arnedos.;Florence Dalenc.;Marie-Paule Sablin.;Mario Campone.;Hervé Bonnefoi.;Claudia Lefeuvre-Plesse.;William Jacot.;Florence Coussy.;Jean-Marc Ferrero.;George Emile.;Marie-Ange Mouret-Reynier.;Jean-Christophe Thery.;Nicolas Isambert.;Alice Mege.;Philippe Barthelemy.;Benoit You.;Nawale Hajjaji.;Ludovic Lacroix.;Etienne Rouleau.;Alicia Tran-Dien.;Sandrine Boyault.;Valery Attignon.;Pierre Gestraud.;Nicolas Servant.;Christophe Le Tourneau.;Linda Larbi Cherif.;Isabelle Soubeyran.;Filippo Montemurro.;Alain Morel.;Amelie Lusque.;Marta Jimenez.;Alexandra Jacquet.;Anthony Gonçalves.;Thomas Bachelot.;Ivan Bieche.
来源: Nature. 2022年610卷7931期343-348页
Cancer progression is driven in part by genomic alterations1. The genomic characterization of cancers has shown interpatient heterogeneity regarding driver alterations2, leading to the concept that generation of genomic profiling in patients with cancer could allow the selection of effective therapies3,4. Although DNA sequencing has been implemented in practice, it remains unclear how to use its results. A total of 1,462 patients with HER2-non-overexpressing metastatic breast cancer were enroled to receive genomic profiling in the SAFIR02-BREAST trial. Two hundred and thirty-eight of these patients were randomized in two trials (nos. NCT02299999 and NCT03386162) comparing the efficacy of maintenance treatment5 with a targeted therapy matched to genomic alteration. Targeted therapies matched to genomics improves progression-free survival when genomic alterations are classified as level I/II according to the ESMO Scale for Clinical Actionability of Molecular Targets (ESCAT)6 (adjusted hazards ratio (HR): 0.41, 90% confidence interval (CI): 0.27-0.61, P < 0.001), but not when alterations are unselected using ESCAT (adjusted HR: 0.77, 95% CI: 0.56-1.06, P = 0.109). No improvement in progression-free survival was observed in the targeted therapies arm (unadjusted HR: 1.15, 95% CI: 0.76-1.75) for patients presenting with ESCAT alteration beyond level I/II. Patients with germline BRCA1/2 mutations (n = 49) derived high benefit from olaparib (gBRCA1: HR = 0.36, 90% CI: 0.14-0.89; gBRCA2: HR = 0.37, 90% CI: 0.17-0.78). This trial provides evidence that the treatment decision led by genomics should be driven by a framework of target actionability in patients with metastatic breast cancer.

28. Non-viral, specifically targeted CAR-T cells achieve high safety and efficacy in B-NHL.

作者: Jiqin Zhang.;Yongxian Hu.;Jiaxuan Yang.;Wei Li.;Mingming Zhang.;Qingcan Wang.;Linjie Zhang.;Guoqing Wei.;Yue Tian.;Kui Zhao.;Ang Chen.;Binghe Tan.;Jiazhen Cui.;Deqi Li.;Yi Li.;Yalei Qi.;Dongrui Wang.;Yuxuan Wu.;Dali Li.;Bing Du.;Mingyao Liu.;He Huang.
来源: Nature. 2022年609卷7926期369-374页
Recently, chimeric antigen receptor (CAR)-T cell therapy has shown great promise in treating haematological malignancies1-7. However, CAR-T cell therapy currently has several limitations8-12. Here we successfully developed a two-in-one approach to generate non-viral, gene-specific targeted CAR-T cells through CRISPR-Cas9. Using the optimized protocol, we demonstrated feasibility in a preclinical study by inserting an anti-CD19 CAR cassette into the AAVS1 safe-harbour locus. Furthermore, an innovative type of anti-CD19 CAR-T cell with PD1 integration was developed and showed superior ability to eradicate tumour cells in xenograft models. In adoptive therapy for relapsed/refractory aggressive B cell non-Hodgkin lymphoma (ClinicalTrials.gov, NCT04213469 ), we observed a high rate (87.5%) of complete remission and durable responses without serious adverse events in eight patients. Notably, these enhanced CAR-T cells were effective even at a low infusion dose and with a low percentage of CAR+ cells. Single-cell analysis showed that the electroporation method resulted in a high percentage of memory T cells in infusion products, and PD1 interference enhanced anti-tumour immune functions, further validating the advantages of non-viral, PD1-integrated CAR-T cells. Collectively, our results demonstrate the high safety and efficacy of non-viral, gene-specific integrated CAR-T cells, thus providing an innovative technology for CAR-T cell therapy.

29. Truncated FGFR2 is a clinically actionable oncogene in multiple cancers.

作者: Daniel Zingg.;Jinhyuk Bhin.;Julia Yemelyanenko.;Sjors M Kas.;Frank Rolfs.;Catrin Lutz.;Jessica K Lee.;Sjoerd Klarenbeek.;Ian M Silverman.;Stefano Annunziato.;Chang S Chan.;Sander R Piersma.;Timo Eijkman.;Madelon Badoux.;Ewa Gogola.;Bjørn Siteur.;Justin Sprengers.;Bim de Klein.;Richard R de Goeij-de Haas.;Gregory M Riedlinger.;Hua Ke.;Russell Madison.;Anne Paulien Drenth.;Eline van der Burg.;Eva Schut.;Linda Henneman.;Martine H van Miltenburg.;Natalie Proost.;Huiling Zhen.;Ellen Wientjens.;Roebi de Bruijn.;Julian R de Ruiter.;Ute Boon.;Renske de Korte-Grimmerink.;Bastiaan van Gerwen.;Luis Féliz.;Ghassan K Abou-Alfa.;Jeffrey S Ross.;Marieke van de Ven.;Sven Rottenberg.;Edwin Cuppen.;Anne Vaslin Chessex.;Siraj M Ali.;Timothy C Burn.;Connie R Jimenez.;Shridar Ganesan.;Lodewyk F A Wessels.;Jos Jonkers.
来源: Nature. 2022年608卷7923期609-617页
Somatic hotspot mutations and structural amplifications and fusions that affect fibroblast growth factor receptor 2 (encoded by FGFR2) occur in multiple types of cancer1. However, clinical responses to FGFR inhibitors have remained variable1-9, emphasizing the need to better understand which FGFR2 alterations are oncogenic and therapeutically targetable. Here we apply transposon-based screening10,11 and tumour modelling in mice12,13, and find that the truncation of exon 18 (E18) of Fgfr2 is a potent driver mutation. Human oncogenomic datasets revealed a diverse set of FGFR2 alterations, including rearrangements, E1-E17 partial amplifications, and E18 nonsense and frameshift mutations, each causing the transcription of E18-truncated FGFR2 (FGFR2ΔE18). Functional in vitro and in vivo examination of a compendium of FGFR2ΔE18 and full-length variants pinpointed FGFR2-E18 truncation as single-driver alteration in cancer. By contrast, the oncogenic competence of FGFR2 full-length amplifications depended on a distinct landscape of cooperating driver genes. This suggests that genomic alterations that generate stable FGFR2ΔE18 variants are actionable therapeutic targets, which we confirmed in preclinical mouse and human tumour models, and in a clinical trial. We propose that cancers containing any FGFR2 variant with a truncated E18 should be considered for FGFR-targeted therapies.

30. A synergistic mindsets intervention protects adolescents from stress.

作者: David S Yeager.;Christopher J Bryan.;James J Gross.;Jared S Murray.;Danielle Krettek Cobb.;Pedro H F Santos.;Hannah Gravelding.;Meghann Johnson.;Jeremy P Jamieson.
来源: Nature. 2022年607卷7919期512-520页
Social-evaluative stressors-experiences in which people feel they could be judged negatively-pose a major threat to adolescent mental health1-3 and can cause young people to disengage from stressful pursuits, resulting in missed opportunities to acquire valuable skills. Here we show that replicable benefits for the stress responses of adolescents can be achieved with a short (around 30-min), scalable 'synergistic mindsets' intervention. This intervention, which is a self-administered online training module, synergistically targets both growth mindsets4 (the idea that intelligence can be developed) and stress-can-be-enhancing mindsets5 (the idea that one's physiological stress response can fuel optimal performance). In six double-blind, randomized, controlled experiments that were conducted with secondary and post-secondary students in the United States, the synergistic mindsets intervention improved stress-related cognitions (study 1, n = 2,717; study 2, n = 755), cardiovascular reactivity (study 3, n = 160; study 4, n = 200), daily cortisol levels (study 5, n = 118 students, n = 1,213 observations), psychological well-being (studies 4 and 5), academic success (study 5) and anxiety symptoms during the 2020 COVID-19 lockdowns (study 6, n = 341). Heterogeneity analyses (studies 3, 5 and 6) and a four-cell experiment (study 4) showed that the benefits of the intervention depended on addressing both mindsets-growth and stress-synergistically. Confidence in these conclusions comes from a conservative, Bayesian machine-learning statistical method for detecting heterogeneous effects6. Thus, our research has identified a treatment for adolescent stress that could, in principle, be scaled nationally at low cost.

31. Combination anti-HIV antibodies provide sustained virological suppression.

作者: Michael C Sneller.;Jana Blazkova.;J Shawn Justement.;Victoria Shi.;Brooke D Kennedy.;Kathleen Gittens.;Jekaterina Tolstenko.;Genevieve McCormack.;Emily J Whitehead.;Rachel F Schneck.;Michael A Proschan.;Erika Benko.;Colin Kovacs.;Cihan Oguz.;Michael S Seaman.;Marina Caskey.;Michel C Nussenzweig.;Anthony S Fauci.;Susan Moir.;Tae-Wook Chun.
来源: Nature. 2022年606卷7913期375-381页
Antiretroviral therapy is highly effective in suppressing human immunodeficiency virus (HIV)1. However, eradication of the virus in individuals with HIV has not been possible to date2. Given that HIV suppression requires life-long antiretroviral therapy, predominantly on a daily basis, there is a need to develop clinically effective alternatives that use long-acting antiviral agents to inhibit viral replication3. Here we report the results of a two-component clinical trial involving the passive transfer of two HIV-specific broadly neutralizing monoclonal antibodies, 3BNC117 and 10-1074. The first component was a randomized, double-blind, placebo-controlled trial that enrolled participants who initiated antiretroviral therapy during the acute/early phase of HIV infection. The second component was an open-label single-arm trial that enrolled individuals with viraemic control who were naive to antiretroviral therapy. Up to 8 infusions of 3BNC117 and 10-1074, administered over a period of 24 weeks, were well tolerated without any serious adverse events related to the infusions. Compared with the placebo, the combination broadly neutralizing monoclonal antibodies maintained complete suppression of plasma viraemia (for up to 43 weeks) after analytical treatment interruption, provided that no antibody-resistant HIV was detected at the baseline in the study participants. Similarly, potent HIV suppression was seen in the antiretroviral-therapy-naive study participants with viraemia carrying sensitive virus at the baseline. Our data demonstrate that combination therapy with broadly neutralizing monoclonal antibodies can provide long-term virological suppression without antiretroviral therapy in individuals with HIV, and our experience offers guidance for future clinical trials involving next-generation antibodies with long half-lives.

32. Intermittent PI3Kδ inhibition sustains anti-tumour immunity and curbs irAEs.

作者: Simon Eschweiler.;Ciro Ramírez-Suástegui.;Yingcong Li.;Emma King.;Lindsey Chudley.;Jaya Thomas.;Oliver Wood.;Adrian von Witzleben.;Danielle Jeffrey.;Katy McCann.;Hayley Simon.;Monalisa Mondal.;Alice Wang.;Martina Dicker.;Elena Lopez-Guadamillas.;Ting-Fang Chou.;Nicola A Dobbs.;Louisa Essame.;Gary Acton.;Fiona Kelly.;Gavin Halbert.;Joseph J Sacco.;Andrew Graeme Schache.;Richard Shaw.;James Anthony McCaul.;Claire Paterson.;Joseph H Davies.;Peter A Brennan.;Rabindra P Singh.;Paul M Loadman.;William Wilson.;Allan Hackshaw.;Gregory Seumois.;Klaus Okkenhaug.;Gareth J Thomas.;Terry M Jones.;Ferhat Ay.;Greg Friberg.;Mitchell Kronenberg.;Bart Vanhaesebroeck.;Pandurangan Vijayanand.;Christian H Ottensmeier.
来源: Nature. 2022年605卷7911期741-746页
Phosphoinositide 3-kinase δ (PI3Kδ) has a key role in lymphocytes, and inhibitors that target this PI3K have been approved for treatment of B cell malignancies1-3. Although studies in mouse models of solid tumours have demonstrated that PI3Kδ inhibitors (PI3Kδi) can induce anti-tumour immunity4,5, its effect on solid tumours in humans remains unclear. Here we assessed the effects of the PI3Kδi AMG319 in human patients with head and neck cancer in a neoadjuvant, double-blind, placebo-controlled randomized phase II trial (EudraCT no. 2014-004388-20). PI3Kδ inhibition decreased the number of tumour-infiltrating regulatory T (Treg) cells and enhanced the cytotoxic potential of tumour-infiltrating T cells. At the tested doses of AMG319, immune-related adverse events (irAEs) required treatment to be discontinued in 12 out of 21 of patients treated with AMG319, suggestive of systemic effects on Treg cells. Accordingly, in mouse models, PI3Kδi decreased the number of Treg cells systemically and caused colitis. Single-cell RNA-sequencing analysis revealed a PI3Kδi-driven loss of tissue-resident colonic ST2 Treg cells, accompanied by expansion of pathogenic T helper 17 (TH17) and type 17 CD8+ T (TC17) cells, which probably contributed to toxicity; this points towards a specific mode of action for the emergence of irAEs. A modified treatment regimen with intermittent dosing of PI3Kδi in mouse models led to a significant decrease in tumour growth without inducing pathogenic T cells in colonic tissue, indicating that alternative dosing regimens might limit toxicity.

33. Nivolumab plus chemotherapy or ipilimumab in gastro-oesophageal cancer.

作者: Kohei Shitara.;Jaffer A Ajani.;Markus Moehler.;Marcelo Garrido.;Carlos Gallardo.;Lin Shen.;Kensei Yamaguchi.;Lucjan Wyrwicz.;Tomasz Skoczylas.;Arinilda Campos Bragagnoli.;Tianshu Liu.;Mustapha Tehfe.;Elena Elimova.;Ricardo Bruges.;Thomas Zander.;Sergio de Azevedo.;Ruben Kowalyszyn.;Roberto Pazo-Cid.;Michael Schenker.;James M Cleary.;Patricio Yanez.;Kynan Feeney.;Michalis V Karamouzis.;Valerie Poulart.;Ming Lei.;Hong Xiao.;Kaoru Kondo.;Mingshun Li.;Yelena Y Janjigian.
来源: Nature. 2022年603卷7903期942-948页
Standard first-line chemotherapy results in disease progression and death within one year in most patients with human epidermal growth factor receptor 2 (HER2)-negative gastro-oesophageal adenocarcinoma1-4. Nivolumab plus chemotherapy demonstrated superior overall survival versus chemotherapy at 12-month follow-up in gastric, gastro-oesophageal junction or oesophageal adenocarcinoma in the randomized, global CheckMate 649 phase 3 trial5 (programmed death ligand-1 (PD-L1) combined positive score ≥5 and all randomized patients). On the basis of these results, nivolumab plus chemotherapy is now approved as a first-line treatment for these patients in many countries6. Nivolumab and the cytotoxic T-lymphocyte antigen-4 (CTLA-4) inhibitor ipilimumab have distinct but complementary mechanisms of action that contribute to the restoration of anti-tumour T-cell function and induction of de novo anti-tumour T-cell responses, respectively7-11. Treatment combining 1 mg kg-1 nivolumab with 3 mg kg-1 ipilimumab demonstrated clinically meaningful anti-tumour activity with a manageable safety profile in heavily pre-treated patients with advanced gastro-oesophageal cancer12. Here we report both long-term follow-up results comparing nivolumab plus chemotherapy versus chemotherapy alone and the first results comparing nivolumab plus ipilimumab versus chemotherapy alone from CheckMate 649. After the 24.0-month minimum follow-up, nivolumab plus chemotherapy continued to demonstrate improvement in overall survival versus chemotherapy alone in patients with PD-L1 combined positive score ≥5 (hazard ratio 0.70; 95% confidence interval 0.61, 0.81) and all randomized patients (hazard ratio 0.79; 95% confidence interval 0.71, 0.88). Overall survival in patients with PD-L1 combined positive score ≥ 5 for nivolumab plus ipilimumab versus chemotherapy alone did not meet the prespecified boundary for significance. No new safety signals were identified. Our results support the continued use of nivolumab plus chemotherapy as standard first-line treatment for advanced gastro-oesophageal adenocarcinoma.

34. GD2-CAR T cell therapy for H3K27M-mutated diffuse midline gliomas.

作者: Robbie G Majzner.;Sneha Ramakrishna.;Kristen W Yeom.;Shabnum Patel.;Harshini Chinnasamy.;Liora M Schultz.;Rebecca M Richards.;Li Jiang.;Valentin Barsan.;Rebecca Mancusi.;Anna C Geraghty.;Zinaida Good.;Aaron Y Mochizuki.;Shawn M Gillespie.;Angus Martin Shaw Toland.;Jasia Mahdi.;Agnes Reschke.;Esther H Nie.;Isabelle J Chau.;Maria Caterina Rotiroti.;Christopher W Mount.;Christina Baggott.;Sharon Mavroukakis.;Emily Egeler.;Jennifer Moon.;Courtney Erickson.;Sean Green.;Michael Kunicki.;Michelle Fujimoto.;Zach Ehlinger.;Warren Reynolds.;Sreevidya Kurra.;Katherine E Warren.;Snehit Prabhu.;Hannes Vogel.;Lindsey Rasmussen.;Timothy T Cornell.;Sonia Partap.;Paul G Fisher.;Cynthia J Campen.;Mariella G Filbin.;Gerald Grant.;Bita Sahaf.;Kara L Davis.;Steven A Feldman.;Crystal L Mackall.;Michelle Monje.
来源: Nature. 2022年603卷7903期934-941页
Diffuse intrinsic pontine glioma (DIPG) and other H3K27M-mutated diffuse midline gliomas (DMGs) are universally lethal paediatric tumours of the central nervous system1. We have previously shown that the disialoganglioside GD2 is highly expressed on H3K27M-mutated glioma cells and have demonstrated promising preclinical efficacy of GD2-directed chimeric antigen receptor (CAR) T cells2, providing the rationale for a first-in-human phase I clinical trial (NCT04196413). Because CAR T cell-induced brainstem inflammation can result in obstructive hydrocephalus, increased intracranial pressure and dangerous tissue shifts, neurocritical care precautions were incorporated. Here we present the clinical experience from the first four patients with H3K27M-mutated DIPG or spinal cord DMG treated with GD2-CAR T cells at dose level 1 (1 × 106 GD2-CAR T cells per kg administered intravenously). Patients who exhibited clinical benefit were eligible for subsequent GD2-CAR T cell infusions administered intracerebroventricularly3. Toxicity was largely related to the location of the tumour and was reversible with intensive supportive care. On-target, off-tumour toxicity was not observed. Three of four patients exhibited clinical and radiographic improvement. Pro-inflammatory cytokine levels were increased in the plasma and cerebrospinal fluid. Transcriptomic analyses of 65,598 single cells from CAR T cell products and cerebrospinal fluid elucidate heterogeneity in response between participants and administration routes. These early results underscore the promise of this therapeutic approach for patients with H3K27M-mutated DIPG or spinal cord DMG.

35. The KEYNOTE-811 trial of dual PD-1 and HER2 blockade in HER2-positive gastric cancer.

作者: Yelena Y Janjigian.;Akihito Kawazoe.;Patricio Yañez.;Ning Li.;Sara Lonardi.;Oleksii Kolesnik.;Olga Barajas.;Yuxian Bai.;Lin Shen.;Yong Tang.;Lucjan S Wyrwicz.;Jianming Xu.;Kohei Shitara.;Shukui Qin.;Eric Van Cutsem.;Josep Tabernero.;Lie Li.;Sukrut Shah.;Pooja Bhagia.;Hyun Cheol Chung.
来源: Nature. 2021年600卷7890期727-730页
Human epidermal growth factor receptor 2 (HER2, also known as ERBB2) amplification or overexpression occurs in approximately 20% of advanced gastric or gastro-oesophageal junction adenocarcinomas1-3. More than a decade ago, combination therapy with the anti-HER2 antibody trastuzumab and chemotherapy became the standard first-line treatment for patients with these types of tumours4. Although adding the anti-programmed death 1 (PD-1) antibody pembrolizumab to chemotherapy does not significantly improve efficacy in advanced HER2-negative gastric cancer5, there are preclinical6-19 and clinical20,21 rationales for adding pembrolizumab in HER2-positive disease. Here we describe results of the protocol-specified first interim analysis of the randomized, double-blind, placebo-controlled phase III KEYNOTE-811 study of pembrolizumab plus trastuzumab and chemotherapy for unresectable or metastatic, HER2-positive gastric or gastro-oesophageal junction adenocarcinoma22 ( https://clinicaltrials.gov , NCT03615326). We show that adding pembrolizumab to trastuzumab and chemotherapy markedly reduces tumour size, induces complete responses in some participants, and significantly improves objective response rate.

36. Megastudies improve the impact of applied behavioural science.

作者: Katherine L Milkman.;Dena Gromet.;Hung Ho.;Joseph S Kay.;Timothy W Lee.;Pepi Pandiloski.;Yeji Park.;Aneesh Rai.;Max Bazerman.;John Beshears.;Lauri Bonacorsi.;Colin Camerer.;Edward Chang.;Gretchen Chapman.;Robert Cialdini.;Hengchen Dai.;Lauren Eskreis-Winkler.;Ayelet Fishbach.;James J Gross.;Samantha Horn.;Alexa Hubbard.;Steven J Jones.;Dean Karlan.;Tim Kautz.;Erika Kirgios.;Joowon Klusowski.;Ariella Kristal.;Rahul Ladhania.;George Loewenstein.;Jens Ludwig.;Barbara Mellers.;Sendhil Mullainathan.;Silvia Saccardo.;Jann Spiess.;Gaurav Suri.;Joachim H Talloen.;Jamie Taxer.;Yaacov Trope.;Lyle Ungar.;Kevin G Volpp.;Ashley Whillans.;Jonathan Zinman.;Angela L Duckworth.
来源: Nature. 2021年600卷7889期478-483页
Policy-makers are increasingly turning to behavioural science for insights about how to improve citizens' decisions and outcomes1. Typically, different scientists test different intervention ideas in different samples using different outcomes over different time intervals2. The lack of comparability of such individual investigations limits their potential to inform policy. Here, to address this limitation and accelerate the pace of discovery, we introduce the megastudy-a massive field experiment in which the effects of many different interventions are compared in the same population on the same objectively measured outcome for the same duration. In a megastudy targeting physical exercise among 61,293 members of an American fitness chain, 30 scientists from 15 different US universities worked in small independent teams to design a total of 54 different four-week digital programmes (or interventions) encouraging exercise. We show that 45% of these interventions significantly increased weekly gym visits by 9% to 27%; the top-performing intervention offered microrewards for returning to the gym after a missed workout. Only 8% of interventions induced behaviour change that was significant and measurable after the four-week intervention. Conditioning on the 45% of interventions that increased exercise during the intervention, we detected carry-over effects that were proportionally similar to those measured in previous research3-6. Forecasts by impartial judges failed to predict which interventions would be most effective, underscoring the value of testing many ideas at once and, therefore, the potential for megastudies to improve the evidentiary value of behavioural science.

37. A COVID-19 peptide vaccine for the induction of SARS-CoV-2 T cell immunity.

作者: Jonas S Heitmann.;Tatjana Bilich.;Claudia Tandler.;Annika Nelde.;Yacine Maringer.;Maddalena Marconato.;Julia Reusch.;Simon Jäger.;Monika Denk.;Marion Richter.;Leonard Anton.;Lisa Marie Weber.;Malte Roerden.;Jens Bauer.;Jonas Rieth.;Marcel Wacker.;Sebastian Hörber.;Andreas Peter.;Christoph Meisner.;Imma Fischer.;Markus W Löffler.;Julia Karbach.;Elke Jäger.;Reinhild Klein.;Hans-Georg Rammensee.;Helmut R Salih.;Juliane S Walz.
来源: Nature. 2022年601卷7894期617-622页
T cell immunity is central for the control of viral infections. CoVac-1 is a peptide-based vaccine candidate, composed of SARS-CoV-2 T cell epitopes derived from various viral proteins1,2, combined with the Toll-like receptor 1/2 agonist XS15 emulsified in Montanide ISA51 VG, aiming to induce profound SARS-CoV-2 T cell immunity to combat COVID-19. Here we conducted a phase I open-label trial, recruiting 36 participants aged 18-80 years, who received a single subcutaneous CoVac-1 vaccination. The primary end point was safety analysed until day 56. Immunogenicity in terms of CoVac-1-induced T cell response was analysed as the main secondary end point until day 28 and in the follow-up until month 3. No serious adverse events and no grade 4 adverse events were observed. Expected local granuloma formation was observed in all study participants, whereas systemic reactogenicity was absent or mild. SARS-CoV-2-specific T cell responses targeting multiple vaccine peptides were induced in all study participants, mediated by multifunctional T helper 1 CD4+ and CD8+ T cells. CoVac-1-induced IFNγ T cell responses persisted in the follow-up analyses and surpassed those detected after SARS-CoV-2 infection as well as after vaccination with approved vaccines. Furthermore, vaccine-induced T cell responses were unaffected by current SARS-CoV-2 variants of concern. Together, CoVac-1 showed a favourable safety profile and induced broad, potent and variant of concern-independent T cell responses, supporting the presently ongoing evaluation in a phase II trial for patients with B cell or antibody deficiency.

38. Behavioural nudges increase COVID-19 vaccinations.

作者: Hengchen Dai.;Silvia Saccardo.;Maria A Han.;Lily Roh.;Naveen Raja.;Sitaram Vangala.;Hardikkumar Modi.;Shital Pandya.;Michael Sloyan.;Daniel M Croymans.
来源: Nature. 2021年597卷7876期404-409页
Enhancing vaccine uptake is a critical public health challenge1. Overcoming vaccine hesitancy2,3 and failure to follow through on vaccination intentions3 requires effective communication strategies3,4. Here we present two sequential randomized controlled trials to test the effect of behavioural interventions on the uptake of COVID-19 vaccines. We designed text-based reminders that make vaccination salient and easy, and delivered them to participants drawn from a healthcare system one day (first randomized controlled trial) (n = 93,354 participants; clinicaltrials number NCT04800965) and eight days (second randomized controlled trial) (n = 67,092 individuals; clinicaltrials number NCT04801524) after they received a notification of vaccine eligibility. The first reminder boosted appointment and vaccination rates within the healthcare system by 6.07 (84%) and 3.57 (26%) percentage points, respectively; the second reminder increased those outcomes by 1.65 and 1.06 percentage points, respectively. The first reminder had a greater effect when it was designed to make participants feel ownership of the vaccine dose. However, we found no evidence that combining the first reminder with a video-based information intervention designed to address vaccine hesitancy heightened its effect. We performed online studies (n = 3,181 participants) to examine vaccination intentions, which revealed patterns that diverged from those of the first randomized controlled trial; this underscores the importance of pilot-testing interventions in the field. Our findings inform the design of behavioural nudges for promoting health decisions5, and highlight the value of making vaccination easy and inducing feelings of ownership over vaccines.

39. Two chemoattenuated PfSPZ malaria vaccines induce sterile hepatic immunity.

作者: Agnes Mwakingwe-Omari.;Sara A Healy.;Jacquelyn Lane.;David M Cook.;Sahand Kalhori.;Charles Wyatt.;Aarti Kolluri.;Omely Marte-Salcedo.;Alemush Imeru.;Martha Nason.;Lei K Ding.;Hope Decederfelt.;Junhui Duan.;Jillian Neal.;Jacob Raiten.;Grace Lee.;Jen C C Hume.;Jihyun E Jeon.;Ijeoma Ikpeama.;Natasha Kc.;Sumana Chakravarty.;Tooba Murshedkar.;L W Preston Church.;Anita Manoj.;Anusha Gunasekera.;Charles Anderson.;Sean C Murphy.;Sandra March.;Sangeeta N Bhatia.;Eric R James.;Peter F Billingsley.;B Kim Lee Sim.;Thomas L Richie.;Irfan Zaidi.;Stephen L Hoffman.;Patrick E Duffy.
来源: Nature. 2021年595卷7866期289-294页
The global decline in malaria has stalled1, emphasizing the need for vaccines that induce durable sterilizing immunity. Here we optimized regimens for chemoprophylaxis vaccination (CVac), for which aseptic, purified, cryopreserved, infectious Plasmodium falciparum sporozoites (PfSPZ) were inoculated under prophylactic cover with pyrimethamine (PYR) (Sanaria PfSPZ-CVac(PYR)) or chloroquine (CQ) (PfSPZ-CVac(CQ))-which kill liver-stage and blood-stage parasites, respectively-and we assessed vaccine efficacy against homologous (that is, the same strain as the vaccine) and heterologous (a different strain) controlled human malaria infection (CHMI) three months after immunization ( https://clinicaltrials.gov/ , NCT02511054 and NCT03083847). We report that a fourfold increase in the dose of PfSPZ-CVac(PYR) from 5.12 × 104 to 2 × 105 PfSPZs transformed a minimal vaccine efficacy (low dose, two out of nine (22.2%) participants protected against homologous CHMI), to a high-level vaccine efficacy with seven out of eight (87.5%) individuals protected against homologous and seven out of nine (77.8%) protected against heterologous CHMI. Increased protection was associated with Vδ2 γδ T cell and antibody responses. At the higher dose, PfSPZ-CVac(CQ) protected six out of six (100%) participants against heterologous CHMI three months after immunization. All homologous (four out of four) and heterologous (eight out of eight) infectivity control participants showed parasitaemia. PfSPZ-CVac(CQ) and PfSPZ-CVac(PYR) induced a durable, sterile vaccine efficacy against a heterologous South American strain of P. falciparum, which has a genome and predicted CD8 T cell immunome that differs more strongly from the African vaccine strain than other analysed African P. falciparum strains.

40. Evaluating microbiome-directed fibre snacks in gnotobiotic mice and humans.

作者: Omar Delannoy-Bruno.;Chandani Desai.;Arjun S Raman.;Robert Y Chen.;Matthew C Hibberd.;Jiye Cheng.;Nathan Han.;Juan J Castillo.;Garret Couture.;Carlito B Lebrilla.;Ruteja A Barve.;Vincent Lombard.;Bernard Henrissat.;Semen A Leyn.;Dmitry A Rodionov.;Andrei L Osterman.;David K Hayashi.;Alexandra Meynier.;Sophie Vinoy.;Kyleigh Kirbach.;Tara Wilmot.;Andrew C Heath.;Samuel Klein.;Michael J Barratt.;Jeffrey I Gordon.
来源: Nature. 2021年595卷7865期91-95页
Changing food preferences brought about by westernization that have deleterious health effects1,2-combined with myriad forces that are contributing to increased food insecurity-are catalysing efforts to identify more nutritious and affordable foods3. Consumption of dietary fibre can help to prevent cardiovascular disease, type 2 diabetes and obesity4-6. A substantial number of reports have explored the effects of dietary fibre on the gut microbial community7-9. However, the microbiome is complex, dynamic and exhibits considerable intra- and interpersonal variation in its composition and functions. The large number of potential interactions between the components of the microbiome makes it challenging to define the mechanisms by which food ingredients affect community properties. Here we address the question of how foods containing different fibre preparations can be designed to alter functions associated with specific components of the microbiome. Because a marked increase in snack consumption is associated with westernization, we formulated snack prototypes using plant fibres from different sustainable sources that targeted distinct features of the gut microbiomes of individuals with obesity when transplanted into gnotobiotic mice. We used these snacks to supplement controlled diets that were consumed by adult individuals with obesity or who were overweight. Fibre-specific changes in their microbiomes were linked to changes in their plasma proteomes indicative of an altered physiological state.
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